Protein ZmMYB56
ZmMYB56 is a protein in the MYB family.
Information
TF Name: ZmMYB56
Species: Maize
TF Family: MYB
Gene Name(Synonym): MYB56
Uniprot ID: B4FII8

Protein ZmMYB56

ZmMYB56 is a protein in the MYB family.

Overview of domains present in v5 transcripts
PF00249PF13921
Zm00001eb028820_T004
Zm00001eb028820_T001
Zm00001eb028820_T002
Zm00001eb028820_T003

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d030678DAPseq no logo sequence fimo position
Zm00001d030678DAPseq no logo sequence fimo position
Zm00001d030678ChIPseq no logo sequence fimo position
Zm00001d030678PChIPseq no logo sequence fimo position

Interactions where ZmMYB56 is the regulator  
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There are 29091 protein-dna interactions that fit this criteria. download excel sheet

Interactions where ZmMYB56 is the target  
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There are 72 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb028820_T004 from maize genome v5

Amino Acid Sequence
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MVTVREETRKGPWTEQEDLQLVCTVRLFGERRWDFIAKVSGLRGLNRTGKSCRLRWVNYLHPGLKRGRMSPHEERLILEL
HARWGNRWSRIARRLPGRTDNEIKNYWRTHMRKKAQERKRNMSPSSSSSSLTYQSGYPDTPSTIGVEGQELHGGSGCITS
ILKGTPPDMDGYPMDQIWMEIEAPQMPSEESFVGGNHNVCSSLATPLPPPTVWEYYPDACWKVDDEIKMATQFQFGYSEG
VGPCF

MVTVREETRKGPWTEQEDLQLVCTVRLFGERRWDFIAKVSGLRGLNRTGKSCRLRWVNYLHPGLKRGRMSPHEERLILEL
HARWGNRWSRIARRLPGRTDNEIKNYWRTHMRKKAQERKRNMSPSSSSSSLTYQSGYPDTPSTIGVEGQELHGGSGCITS
ILKGTPPDMDGYPMDQIWMEIEAPQMPSEESFVGGNHNVCSSLATPLPPPTVWEYYPDACWKVDDEIKMATQFQFGYSEG
VGPCF

MVTVREETRKGPWTEQEDLQLVCTVRLFGERRWDFIAKVSGLRGLNRTGKSCRLRWVNYLHPGLKRGRMSPHEERLILEL
HARWGNRWSRIARRLPGRTDNEIKNYWRTHMRKKAQERKRNMSPSSSSSSLTYQSGYPDTPSTIGVEGQELHGGSGCITS
ILKGTPPDMDGYPMDQIWMEIEAPQMPSEESFVGGNHNVCSSLATPLPPPTVWEYYPDACWKVDDEIKMATQFQFGYSEG
VGPCF

MVTVREETRKGPWTEQEDLQLVCTVRLFGERRWDFIAKVSGLRGLNRTGKSCRLRWVNYLHPGLKRGRMSPHEERLILEL
HARWGNRWSRIARRLPGRTDNEIKNYWRTHMRKKAQERKRNMSPSSSSSSLTYQSGYPDTPSTIGVEGQELHGGSGCITS
ILKGTPPDMDGYPMDQIWMEIEAPQMPSEESFVGGNHNVCSSLATPLPPPTVWEYYPDACWKVDDEIKMATQFQFGYSEG
VGPCF

MVTVREETRKGPWTEQEDLQLVCTVRLFGERRWDFIAKVSGLRGLNRTGKSCRLRWVNYLHPGLKRGRMSPHEERLILEL
HARWGNRWSRIARRLPGRTDNEIKNYWRTHMRKKAQERKRNMSPSSSSSSLTYQSGYPDTPSTIGVEGQELHGGSGCITS
ILKGTPPDMDGYPMDQIWMEIEAPQMPSEESFVGGNHNVCSSLATPLPPPTVWEYYPDACWKVDDEIKMATQFQFGYSEG
VGPCF

MVTVREETRKGPWTEQEDLQLVCTVRLFGERRWDFIAKVSGLRGLNRTGKSCRLRWVNYLHPGLKRGRMSPHEERLILEL
HARWGNRWSRIARRLPGRTDNEIKNYWRTHMRKKAQERKRNMSPSSSSSSLTYQSGYPDTPSTIGVEGQELHGGSGCITS
ILKGTPPDMDGYPMDQIWMEIEAPQMPSEESFVGGNHNVCSSLATPLPPPTVWEYYPDACWKVDDEIKMATQFQFGYSEG
VGPCF

MVTVREETRKGPWTEQEDLQLVCTVRLFGERRWDFIAKVSGLRGLNRTGKSCRLRWVNYLHPGLKRGRMSPHEERLILEL
HARWGNRWSRIARRLPGRTDNEIKNYWRTHMRKKAQERKRNMSPSSSSSSLTYQSGYPDTPSTIGVEGQELHGGSGCITS
ILKGTPPDMDGYPMDQIWMEIEAPQMPSEESFVGGNHNVCSSLATPLPPPTVWEYYPDACWKVDDEIKMATQFQFGYSEG
VGPCF

MVTVREETRKGPWTEQEDLQLVCTVRLFGERRWDFIAKVSGLRGLNRTGKSCRLRWVNYLHPGLKRGRMSPHEERLILEL
HARWGNRWSRIARRLPGRTDNEIKNYWRTHMRKKAQERKRNMSPSSSSSSLTYQSGYPDTPSTIGVEGQELHGGSGCITS
ILKGTPPDMDGYPMDQIWMEIEAPQMPSEESFVGGNHNVCSSLATPLPPPTVWEYYPDACWKVDDEIKMATQFQFGYSEG
VGPCF

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF00249
PF13921
PF00249
PF13921
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Nucleotide Sequence
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TACCTATAAATGAGAGGCAAAAGCC...

GRMZM2G130149_T01 from maize genome v3


Related TFome: pUT5678

Amino Acid Sequence
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MVTVREETRKGPWTEQEDLQLVCTVRLFGERRWDFIAKVSGLNRTGKSCRLRWVNYLHPGLKRGRMSPHEERLILELHAR
WGNRWSRIARRLPGRTDNEIKNYWRTHMRKKAQERKRNMSPSSSSSSLTYQSGYPDTPSTIGVEGQELHGGSGCITSILK
GTPPDMDGYPMDQIWMEIEAPQMPSEESFVGGNHNVCSSLATPLPPPTVWEYYPDACWKVDDEIKMATQFQFGYSEGVGP
CF

Nucleotide Sequence
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CAAAGGCGCGGTAAAAATAAAAAAC...

GRMZM2G130149_T02 from maize genome v3

Amino Acid Sequence
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MVTVREETRKGPWTEQEDLQLVCTVRLFGERRWDFIAKVSGLNRTGKSCRLRWVNYLHPGLKRGRMSPHEERLILELHAR
WGNRWSRIARRLPGRTDNEIKNYWRTHMRKKAQERKRNMSPSSSSSSLTYQSGYPDTPSTIGVEGQELHGGSGCITSILK
GTPPDMDGYPMDQIWMEIEAPQMPSEESFVGGNHNVCSSLATPLPPPTVWEYYPDACWKVDDEIKMATQFQFGYSEGVGP
CF

Nucleotide Sequence
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CTTTATAGGGAGCTCCAAATCACAC...

GRMZM2G130149_T03 from maize genome v3

Amino Acid Sequence
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MSPHEERLILELHARWGNRWSRIARRLPGRTDNEIKNYWRTHMRKKAQERKRNMSPSSSSSSLTYQSGYPDTPSTIGVEG
QELHGGSGCITSILKGTPPDMDGYPMDQIWMEIEAPQMPSEESFVGGNHNVCSSLATPLPPPTVWEYYPDACWKVDDEIK
MATQFQFGYSEGVGPCF

Nucleotide Sequence
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CTTTATAGGGAGCTCCAAATCACAC...

GRMZM2G130149_T04 from maize genome v3

Amino Acid Sequence
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MVTVREETRKGPWTEQEDLQLVCTVRLFGERRWDFIAKVSGLRGLNRTGKSCRLRWVNYLHPGLKRGRMSPHEERLILEL
HARWGNRWSRIARRLPGRTDNEIKNYWRTHMRKKAQERKRNMSPSSSSSSLTYQSGYPDTPSTIGVEGQELHGGSGCITS
ILKGTPPDMDGYPMDQIWMEIEAPQMPSEESFVGGNHNVCSSLATPLPPPTVWEYYPDACWKVDDEIKMATQFQFGYSEG
VGPCF

Nucleotide Sequence
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CCAATACCTCCCCCTCTCTTACCTA...

GRMZM2G130149_T05 from maize genome v3

Amino Acid Sequence
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MSPHEERLILELHARWGNRWSRIARRLPGRTDNEIKNYWRTHMRKKAQERKRNMSPSSSSSSLTYQSGYPDTPSTIGVEG
QELHGGSGCITSILKGTPPDMDGYPMDQIWMEIEAPQMPSEESFVGGNHNVCSSLATPLPPPTVWEYYPDACWKVDDEIK
MATQFQFGYSEGVGPCF

Nucleotide Sequence
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CCAATACCTCCCCCTCTCTTACCTA...

GRMZM2G130149_T06 from maize genome v3

Amino Acid Sequence
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MDRAGGPATGLNRTGKSCRLRWVNYLHPGLKRGRMSPHEERLILELHARWGNRWSRIARRLPGRTDNEIKNYWRTHMRKK
AQERKRNMSPSSSSSSLTYQSGYPDTPSTIGVEGQELHGGSGCITSILKGTPPDMDGYPMDQIWMEIEAPQMPSEESFVG
GNHNVCSSLATPLPPPTVWEYYPDACWKVDDEIKMATQFQFGYSEGVGPCF

Nucleotide Sequence
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GATCGATATGGTGACAGTGAGAGAG...

Zm00001d030678_T001 from maize genome v4

Amino Acid Sequence
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MVTVREETRKGPWTEQEDLQLVCTVRLFGERRWDFIAKVSGLNRTGKSCRLRWVNYLHPGLKRGRMSPHEERLILELHAR
WGNRWSRIARRLPGRTDNEIKNYWRTHMRKKAQERKRNMSPSSSSSSLTYQSGYPDTPSTIGVEGQELHGGSGCITSILK
GTPPDMDGYPMDQIWMEIEAPQMPSEESFVGGNHNVCSSLATPLPPPTVWEYYPDACWKVDDEIKMATQFQFGYSEGVGP
CF

Nucleotide Sequence
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CCAATACCTCCCCCTCTCTTACCTA...

Zm00001d030678_T002 from maize genome v4

Amino Acid Sequence
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MSPHEERLILELHARWGNRWSRIARRLPGRTDNEIKNYWRTHMRKKAQERKRNMSPSSSSSSLTYQSGYPDTPSTIGVEG
QELHGGSGCITSILKGTPPDMDGYPMDQIWMEIEAPQMPSEESFVGGNHNVCSSLATPLPPPTVWEYYPDACWKVDDEIK
MATQFQFGYSEGVGPCF

Nucleotide Sequence
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AGGCAACTAAGACAAAGTGGCGTAC...

Zm00001d030678_T003 from maize genome v4

Amino Acid Sequence
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MDRAGGPATGLNRTGKSCRLRWVNYLHPGLKRGRMSPHEERLILELHARWGNRWSRIARRLPGRTDNEIKNYWRTHMRKK
AQERKRNMSPSSSSSSLTYQSGYPDTPSTIGVEGQELHGGSGCITSILKGTPPDMDGYPMDQIWMEIEAPQMPSEESFVG
GNHNVCSSLATPLPPPTVWEYYPDACWKVDDEIKMATQFQFGYSEGVGPCF

Nucleotide Sequence
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AGGCAACTAAGACAAAGTGGCGTAC...

Zm00001d030678_T004 from maize genome v4

Amino Acid Sequence
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MDRAGGPATGLNRTGKSCRLRWVNYLHPGLKRGRMSPHEERLILELHARWGNRWSRIARRLPGRTDNEIKNYWRTHMRKK
AQERKRNMSPSSSSSSLTYQSGYPDTPSTIGVEGQELHGGSGCITSILKGTPPDMDGYPMDQIWMEIEAPQMPSEESFVG
GNHNVCSSLATPLPPPTVWEYYPDACWKVDDEIKMATQFQFGYSEGVGPCF

Nucleotide Sequence
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AAGACAAAGTGGCGTACTCTTCTCT...

Zm00001eb028820_T001 from maize genome v5

Amino Acid Sequence
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MVTVREETRKGPWTEQEDLQLVCTVRLFGERRWDFIAKVSGLNRTGKSCRLRWVNYLHPGLKRGRMSPHEERLILELHAR
WGNRWSRIARRLPGRTDNEIKNYWRTHMRKKAQERKRNMSPSSSSSSLTYQSGYPDTPSTIGVEGQELHGGSGCITSILK
GTPPDMDGYPMDQIWMEIEAPQMPSEESFVGGNHNVCSSLATPLPPPTVWEYYPDACWKVDDEIKMATQFQFGYSEGVGP
CF

Nucleotide Sequence
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CTTTATAGGGAGCTCCAAATCACAC...

Zm00001eb028820_T002 from maize genome v5

Amino Acid Sequence
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MDRAGGPATGLNRTGKSCRLRWVNYLHPGLKRGRMSPHEERLILELHARWGNRWSRIARRLPGRTDNEIKNYWRTHMRKK
AQERKRNMSPSSSSSSLTYQSGYPDTPSTIGVEGQELHGGSGCITSILKGTPPDMDGYPMDQIWMEIEAPQMPSEESFVG
GNHNVCSSLATPLPPPTVWEYYPDACWKVDDEIKMATQFQFGYSEGVGPCF

Nucleotide Sequence
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TACCTATAAATGAGAGGCAAAAGCC...

Zm00001eb028820_T003 from maize genome v5

Amino Acid Sequence
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MSPHEERLILELHARWGNRWSRIARRLPGRTDNEIKNYWRTHMRKKAQERKRNMSPSSSSSSLTYQSGYPDTPSTIGVEG
QELHGGSGCITSILKGTPPDMDGYPMDQIWMEIEAPQMPSEESFVGGNHNVCSSLATPLPPPTVWEYYPDACWKVDDEIK
MATQFQFGYSEGVGPCF

Nucleotide Sequence
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TACCTATAAATGAGAGGCAAAAGCC...


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